So I have run into this certain issue lately involving dropdown navigation menus and IE6. It doesn't happen all the time, but with certain sites I have noticed the background on menu items disappearing when you hover over them to display the dropdown. It doesn't always only cause the hovered item's background to disappear, but sometimes also the background of the items continuing to the right of the hovered item.
I am pretty sure this is being caused by the Javascript that was written for the dropdowns to work, specifically for IE6. The dropdowns do appear in other browsers without the use of the Javascript. The JS in question simply changes the name of the class applied to your hovered item. I tried to use JQuery instead, and got the same result.
Upon further inspection today, I found that this is only happening when your main nav items are using background images, instead of pure CSS colors. The images I am using are even sprites, so there is no apparent reason for their disappearance. One site I am seeing this behavior on is our own, so that can easily be changed to not use images. The other, unfortunately, is a client site. The designer has designed the site in such a way that images are necessary, and as we recently discovered, the client is using IE6.
So much for ignoring the obsolete.